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[[IT memo]]

*Setting up isotope.ccsr.u-tokyo.ac.jp [#c016b9ad]
#contents

**specification [#b24819eb]
 Name: isotope
 IP: 157.82.233.153
 Body: HP Z600
 CPU: Xeon E5520 (2.26GHz, quad core) x2
 RAM: 6GB
 HDD: 1TB x2
 OS: RedHat Enterprise Linux 5 (Server)

** RHEL 5.4 [#za3ad3c1]
Multi languages and Developer's tools can be installed later by "Applications" -> "Add/Remove Software" -> "Languages" or "Development".
** softwares [#s2287c48]

*** Intel compilers (11.1) [#yb4e4f32]
http://software.intel.com/en-us/articles/non-commercial-software-download/ からIntel® Compiler Suite Professional Edition for Linuxを選び、ダウンロード。解凍後
、install.shを起動する。
*** MPICH1.2.7 [#cab5efe7]
 ./configure --enable-debug --prefix=/usr/local/mpich -rsh=/usr/bin/ssh
 make
 su
 make install
-$MPICHDIR/exampleのhello++.ccのコンパイルでなぜか止まるが、実用上は問題なし。
-$HOME/.ssh/authorized_keysに$HOME/.ssh/id_rsa.pubもしくはid_dsa.pubを追加しておくことが必要。

*** NetCDF4.0.1 [#r6ddfa36]
 setenv FC ifort
 setenv CC icc
 setenv CXX icc
 setenv CPPFLAGS -DpgiFortran
 ./configure --prefix=/usr/local/netcdf
 make
 su
 make install