* Memo for compas.ucsd.edu [#i630b64c] - Specification: -- 160 nodes, 320 CPUs cluster. -- 5 racks, 0-1: P4 with myrinet, 2-3: P3 with myrinet, 4: P3 -- 2GB memory for one node. ** Note for GSM/RSM run [#kb28dea3] Should change compilers in libs/opt_libs/options-linux-mpi and gsm/opt/options-linux-mpi as follows: -rack0-1: mpif90 -rack2-3: mpif90_PIII -rack4: ** Using Myrinet (rack 2&3) [#na6d5851] - With Myrinet: Make path to /opt/mpich/myrinet/pgi/bin - Without Myrinet (GigE): Make path to /opt/mpich/pgi/bin -- In this case, the node_list should be like "compas-3-0.sio.optiputer.net" ** How to run GSM from first login [#z8fc122f] + ssh to compas $ ssh -l kei compas You are asked to make specific pass phrases, but Do not make them and just hit enter. + set your environment modify ~/.bashrc (bash) or ~/.cshrc (tcsh) PATH, LD_LIBRARY_PATH, LM_LICENSE_FILE, CVSROOT are important. + install GSM $ mkdir GSM ; cd GSM $ install --model=gsm --date=20061218 lo choose mpi, T62, gsm + re-compile GSM-libs $ cd libs modify opt_libs/options-linux-mpi all "pgf90" -> "mpif90_PIII" (when you use compute-3-XX) $ configure-libs $ make clean ; make + re-compile GSM $ cd gsm modify opt/options-linux-mpi all "pgf90" -> "mpif90_PIII" $ configure-models $ make clean ; make + make "node_list" edit ~/node_list (in your home directory) compute-3-16 compute-3-16 compute-3-17 compute-3-17 : compute-3-31 + test run! $ cd gruns $ gsm